Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889819.1_cds_XP_016444488.1_39543
CDS Infomation

[gene=LOC107769758] [db_xref=GeneID:107769758] [protein=4-coumarate--CoA ligase 2-like] [protein_id=XP_016444488.1] [location=complement(join(10936..11061,11184..11289,11388..11455,11599..11744,12132..12330,14374..15444))] [gbkey=CDS]
Sequence

ATGTTGAGTGTAGCTAGTGTTGAAGCCCAAAAGGCAGAGTTATCTTCTTCTGTGATTCCT
TCTTCTAATCAATCTTCTGAAGAGTTACATGTATTTAGATCAAGATTACCAGATATAACC
ATTTCTAATAACGTCCCTCTTCATGTCTATTTATTTGAGAGGCTCTCTGAATTTCAAGAT
AGGACATGTCTTATATCAGGCAGCAGTGGGAAATCATACACTTTTGCTGAAACTCATCTC
ATTTGTCAGAAAATAGCTGCTGGTTTAACAAATATAGGAATCAAAAAGGGAGATGTAATC
ATGACTTTTCTCCAGAACTGCGCTGAATTTGTGTTTACTTTTCTCTCGGCTTCTATGATC
GGCGCTGTTATAACTACAGCTAATCCATTCTACACAAAAGCTGAAGCGTTTAAGCAATTA
AAAGCGTCGAATGCAAAACTAATCGTTACTCAATCTCAGTACGTGGATAAATTTCGTGAT
TCTGGAGAGAATGACCTTAAAATTGGCGAAGATTTTTCAGTCGTTACAGTCGATGACCCT
CCTGAAAATTGTTTACATTTCTATGTACTTTCTGAAGCTAACGAAGAGGAAATGCCAAAG
GGAATTGTAATCCAACCCGATGACCCAGTAGCTTTACCATTTTCTTCAGGAACAACAGGG
CTACCAAAAGGTGTGATTTTAACTCACAAAAGTTTAATCACAGGAGTAGCTCAATTAGTC
GACGGAGACAATCCAAATTTGTACTTGAAAAATGATGACGTGGTGCTATGTGTGCTACCT
CTGTTTCACATATTTGCGCTAAATTCAGTGCTTTTAGTCTCGTTAAGAGCCGGAGCTAGT
GTTTTATTAATGCAAAAATTCGAAATTGGTGCATTGCTGGAGCTGATACAAAACCACCGC
GTGTCAGTTGCTGCTGTAGTTCCGCCCTTGGTTCTTGCGTTGGCGAAAAATCCGATGGTT
GATTCGTTCGATTTGAGTTCGATTAGGCTCGTGTTGTCCGGGGCGGCGCCGCTGGGGAAA
GAGTTGGAGGAAGCGCTGCATCGTAGAGTCCCGCAAGCTATATTTGGACAGGGGTATGGT
ATGACAGAGGCAGGACCAGTAGTAACAATGTGCCCAGCATTTGCAAAGCAACCATTTTCA
ACCAAATCTGGCTCATGTGGTTCAGTAGTTCGAAATGCAGACCTCAAAGTGGTCGACCGT
GAAACTGGTGGCTCCCTTGGCCGCAACCAACCCGGTGAAATTTGCATTCGCGGTTCACAA
ATCATGAAAGGTTATTTGAATGATGATGAAGCCACTGCACGGACCATTGATGTCAATGGA
TGGCTCCACACTGGTGATATTGGATACGTAGATGACGATGATGAAATATACATCGTCGAT
AGAGTGAAAGAGCTCATCAAGTTCAAAGGTTTCCAGGTGCCACCAGCTGAGCTTGAGTCT
CTTCTGATAAGCCATCCAGATATTGCAGATGCTGCTGTTGTACCGCAAAAGGATGATGCG
GCAGGGGAAGTCCCAGTTGCATTTGTGGTCCGCTCCGCCAATGGTTTTGAAATTACTGAA
GAAGCTATAAAGGAATTTATTGCCAAACAGGTGATATTCTATAAAAGATTGCACAAGGTG
TATTTTATTCACGCCATTCCAAAGTCTCCGTCTGGAAAGATACTGAGGAAAGAACTGAGA
GCCAAACTAGCTGCGCCACCAGCCTCTACCCAGTGA

Peptide Sequence

PEP ID

XP_016444488.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase 2-like [Nicotiana tabacum]
Sequence

MLSVASVEAQKAELSSSVIPSSNQSSEELHVFRSRLPDITISNNVPLHVYLFERLSEFQD
RTCLISGSSGKSYTFAETHLICQKIAAGLTNIGIKKGDVIMTFLQNCAEFVFTFLSASMI
GAVITTANPFYTKAEAFKQLKASNAKLIVTQSQYVDKFRDSGENDLKIGEDFSVVTVDDP
PENCLHFYVLSEANEEEMPKGIVIQPDDPVALPFSSGTTGLPKGVILTHKSLITGVAQLV
DGDNPNLYLKNDDVVLCVLPLFHIFALNSVLLVSLRAGASVLLMQKFEIGALLELIQNHR
VSVAAVVPPLVLALAKNPMVDSFDLSSIRLVLSGAAPLGKELEEALHRRVPQAIFGQGYG
MTEAGPVVTMCPAFAKQPFSTKSGSCGSVVRNADLKVVDRETGGSLGRNQPGEICIRGSQ
IMKGYLNDDEATARTIDVNGWLHTGDIGYVDDDDEIYIVDRVKELIKFKGFQVPPAELES
LLISHPDIADAAVVPQKDDAAGEVPVAFVVRSANGFEITEEAIKEFIAKQVIFYKRLHKV
YFIHAIPKSPSGKILRKELRAKLAAPPASTQ

Transcript Sequence

Gene sequence data has not been registered.